Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYEWLNALPKAELHLHLEGTLEPELLFALAERNRIALPWNDVETLRKAYAFN---NLQEFLDLY-YAGADVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQ------------THTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFLRH----------LSEEQAQKTLDQALPFRDAFIAVGLDSSEVGHPPSKFQ---RVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKVERIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCVFDDMSQHTILDMLERGVKVTVNSDDPAYFGGYVTENFHALQQSLGMTEEQARRLAQNSLDARLVK |
| 2ADA Chain:A ((10-335)) | --------PKVELHVHLDGAIKPETILYFGKKRGIALPADTVEELRNIIGMDKPLSLPGFLAKFDYYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVDPMPWNQTEGDVTPDDVVDLVNQGLQEGEQAFGIKVRSILCCMRHQPSWSLEVLELCKKYNQKTV----------VAMDLAGDETIEGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVREAVDILKTERVGHGYHTIEDEALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKNDKANYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2ADA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -144573 for 2551 contacts (-56.7/contact) +
2D Compatibility (PS) -32195 + (NN) -15511 + (LL) 1632
1D Compatibility (HY) -21200 + (ID) 4500
Total energy: -216347.0 ( -84.81 by residue)
QMean score : 0.436
|
|
|