Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPI----PEDLDV---RLSGQRIVSVERRAKYLLLGAEAGTLISHLGMSGSLRLVESGTPASRHEHVDIELASGMALRYTDPRRFGAMLWSLAPLEHEL---LRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVGVGNIYASEALFAAGIDPRKPAGSISKARYLRLAEEIKRILAIAIERGGTTLRDFVGGDGQPGYFQQELFVYGRGGEFCKVCGSTLREIRLGQRASVYCPRCQR |
| 1L2D Chain:A ((2-274)) | -PELPEVETIRRTLLPLIVGKTIEDV-----RIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTM-HVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGS--------------FQHHLYVYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115325 for 1927 contacts (-59.8/contact) +
2D Compatibility (PS) -26318 + (NN) -8863 + (LL) 968
1D Compatibility (HY) -17200 + (ID) 5400
Total energy: -172138.0 ( -89.33 by residue)
QMean score : 0.481
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