Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLKITDDCINCDVCEPECPNGAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPV-DCIPLDDANVESKDQLMEKYRKITGKA
2ZVS Chain:A ((1-76))
-ALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGHYETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMHH--
General information:
TITO was launched using:
RESULT:
Template:
2ZVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31867 for 517 contacts (-61.6/contact) +
2D Compatibility (PS) -7934 + (NN) -8641 + (LL) 372
1D Compatibility (HY) -8400 + (ID) 2200
Total energy: -58670.0 ( -113.48 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_2ZVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZVS-query.scw
PDB file :
Tito_Scwrl_2ZVS.pdb
: