Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDCLFCKIVAGEVPARKFYEDEEVVAFHDIGPQAPVHFLVIPKRHIPTLEHLTEADRPLAGHILFTAQRLAREQGCEEGFRVVMNCNDLGGQTVHHIHMHVLGQRQMHWPPG
3RHN Chain:A ((5-115))
-DTIFGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG
General information:
TITO was launched using:
RESULT:
Template:
3RHN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92902 for 766 contacts (-121.3/contact) +
2D Compatibility (PS) -12341 + (NN) -9472 + (LL) 208
1D Compatibility (HY) -11200 + (ID) 2750
Total energy: -128457.0 ( -167.70 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_3RHN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RHN-query.scw
PDB file :
Tito_Scwrl_3RHN.pdb
: