Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQFFLRYAYAPLFWSGFIGLATWQVGYRQASHAWLVALFLGALGLSFLAERRLPYQPRWNRPHADRLRDVLHASVNESLNALGILALPLLAGVLGFWPVWPQAWPLWLQLLLAIVLADLGITLVHYASHRSALLWRLHAVHHSVQRLYGFNGLMKHPLHLGLEALGGTLPLLLLGVPQTVAALLAFAIGIQLLLQHSNVDMRIGGLRHVFAWAPLHRLHHIRYGRAGDVNFALFFSVWDRLLGTALHRPDYRLDSTDMGIGDQPDYPRDYAGQLLAPFRDLPRSRHVPQPPEGLGRSAGQA |
4QT9 Chain:A ((371-421)) | -------------------------------------------------------------------------------------------GPFGFYDAFSETDNWYPQRYLAI---DQGPIAVMIENYRTGLLWKLFMSHPDVQAGLTKLGFNTN------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14635 for 230 contacts (-63.6/contact) +
2D Compatibility (PS) -5094 + (NN) -2556 + (LL) 16852
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -9133.0 ( -39.71 by residue)
QMean score : -0.231
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