Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADETELKRLYWHSRRGMLELDVLLVPFVQEVYPGLDAEDQARFRKLLECEDQDMFGWFMQRGEPEDADLRRMVRMILDRVQPD
2RGO Chain:A ((496-563))
--DATYIADFYGTNARRIFELAKE-AP-----YPGLSLAESARLRYGLEEE---------MVLAPGDYLIRRTNHLLFERDQLD
General information:
TITO was launched using:
RESULT:
Template:
2RGO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15871 for 401 contacts (39.6/contact) +
2D Compatibility (PS) -7185 + (NN) -3097 + (LL) 1900
1D Compatibility (HY) -2000 + (ID) 1200
Total energy: 4289.0 ( 10.70 by residue)
QMean score : 0.242
(partial model without unconserved sides chains):
PDB file :
Tito_2RGO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RGO-query.scw
PDB file :
Tito_Scwrl_2RGO.pdb
: