Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSELILLHNPRCSKSRAALELLEARGLQPQVVRYLETPPSAAELKAILAKLGIPARQLLRTGEDEYKALGLDEPSLGEEAIIEAMARHPKLIERPVLVAGDKAVVGRPPERVLEILA
1S3C Chain:A ((3-116))
--NITIYHNPASGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAEDKFTDDQLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLDILQ
General information:
TITO was launched using:
RESULT:
Template:
1S3C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83998 for 860 contacts (-97.7/contact) +
2D Compatibility (PS) -12605 + (NN) -10575 + (LL) 180
1D Compatibility (HY) -12000 + (ID) 2250
Total energy: -121248.0 ( -140.99 by residue)
QMean score : 0.822
(partial model without unconserved sides chains):
PDB file :
Tito_1S3C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S3C-query.scw
PDB file :
Tito_Scwrl_1S3C.pdb
: