Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPIHNLNHVNMFLQVIASGSISSAARILRKSHTAVSSAVSNLEIDLCVELVRRDGYKVEPTEQALRLI----PYMRSLLNYQQLIGDIAFNLN-----KGPRNLRVLLDTAIPPSFCDTVSSVLLDDFNMVSLIRTSPADSLATIKQDNAEIDIAITIDEELKISRFNQCVLGYTKAFVVAHPQH------PLCNASLHSIASLANYRQISLGSRSGQHSNLLRPVSDKVLFVENFDDMLR-LVEAGVGWGIAPHYFVEERLRNGTLA-VLSELYEPGGIDTKVYCYYNTALESERSFLRFLESARQRLRELGRQRFDDAPAWQPSIVETAQRRSGPKALAYRQRAAPE |
| 3SZP Chain:A ((2-285)) | ----KLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDI------HIELMMSNQADDL-----DPTEWDVIFRVGPQRDSSLIARKI-GEVKDILVASPQYLSSHPQPTHAEELHQHQLLKGYPLLKWQLTNSQGETVVN--SDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVIGYHL------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -118335 for 1872 contacts (-63.2/contact) +
2D Compatibility (PS) -27757 + (NN) -95 + (LL) 4376
1D Compatibility (HY) -14800 + (ID) 3150
Total energy: -159761.0 ( -85.34 by residue)
QMean score : 0.263
|
|
|