Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSHSPIATVAQALRRAERILVITGAGLSADSGMPTYRGLGGLYNGRTEEGLPIEAALSGPMLRRDPALCWKYLAELGKACLAARPNAGHEAIAELQKHKPECWVLTQNIDGFHRQAGSPAERLIEIHGELAPLYCQSCGAESGGLEEHLHGQLP--PRCAACGGVLRPPVVLFEEMLPEEAIDTLYRELRKGFDAVLVVGTTASFPYIVEPV----LRTRQAGGFTAEVNPGVTDLSERVDVKMTGRALDIMPQVVSHIYR
1M2J Chain:A ((7-242))-----------KTIAESKYLVALTGAGVSAESGIPTFRGKDGLWNRYRPEELANPQAFA-----KDPEKVWKWYAWRMEKVFNAQPNKANQAFAELERLGVLKCLITQNVDDLHERAGS--RNVIHLHGSLRVVRCTSC---NNSFEVESAPKIPPLPKCDKCGSLLRPGVVWFGEMLPPDVLDRAMREVERA-DVIIVAGTSA----VVQPAASLPLIVKQRGGAIIEINPDETPLTPIADYSLRGKAGEVMDELVRHVRK


General information:
TITO was launched using:
RESULT:

Template: 1M2J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109684 for 1902 contacts (-57.7/contact) +
2D Compatibility (PS) -24675 + (NN) -11302 + (LL) 1156
1D Compatibility (HY) -18000 + (ID) 4300
Total energy: -166805.0 ( -87.70 by residue)
QMean score : 0.429

(partial model without unconserved sides chains):
PDB file : Tito_1M2J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M2J-query.scw
PDB file : Tito_Scwrl_1M2J.pdb: