Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFEHLVQVNDRTLVDLPVLDRLQLWEGLVCRAREPQYFVVGLERFEILVDDGDRLHRR--LYLPG--LVVEDEVVLKAPD-SAHYSIKPSAEV-AGGSLDMTIEEPEPGSLFVRFAYCTR--YLQPL----GD--ELPYDAFVKQAYIAMDVETIATIRDRFGASAASGS
3TFZ Chain:A ((6-161))
-HVEHTVTVAAPA---------DLVWEVLADVLGYA-DIFPPTEKVEILEEGQGYQVVRLHVDVAGEINTWTSRRDLDPARRVIAYRQLETAPIVGHMSGEWRAFTLDAERTQLVLTHDFVTRAAGDDGLVAGKLTPDEAREMLEAVVERNSVADLNAVLGEAERRVRAAG
General information:
TITO was launched using:
RESULT:
Template:
3TFZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60002 for 966 contacts (-62.1/contact) +
2D Compatibility (PS) -15454 + (NN) -5236 + (LL) 1048
1D Compatibility (HY) 1200 + (ID) 950
Total energy: -79394.0 ( -82.19 by residue)
QMean score : 0.288
(partial model without unconserved sides chains):
PDB file :
Tito_3TFZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TFZ-query.scw
PDB file :
Tito_Scwrl_3TFZ.pdb
: