Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQRIRIIDSHTGGEPTRLVIGGFPDLGQGDMAERRRLLGERHDAWRAACILEPRGSDVLVGALLCAPVDPEACAGVIFFNNSGYLGMCGHGTIGLVASLAHLGRIG--------PGVHRIETPVGEVEATLH-------EDGSVSVRNVPAYRYRRQVSVEVPG-IGRVSGDIAWGGNWFFLVAGH--GQRLAGDNLDALTA----YTVAVQQALDDQDIRGEDGGAIDHIELFA--DDPHADSRNFVLCPGKAYDRSPCGTGTSAKLACLAADGKLLPGQPWRQASVIGSQFEGRYEWLDGQPG-----------GPIVPT--IRGRAHVSAEATLLLADDDPFAWGIRR |
1W62 Chain:A ((49-389)) | ------IDMHTEGEAARIVTSGLPHIPGSNMAEKKAYLQENMDYLRRGIMLEPRGHDDMFGAFLFDPIEEGADLGIVFMDTGGYLNMCGHNSIAAVTAAVETGIVSVPAKATNVPVV--LDTPAGLVRGTAHLQSGTESEVSNASIINVPSFLYQQDVVVVLPKPYGEVRVDIAFGGNFFAIVPAEQLGIDISVQNLSRLQEAGELLRTEINRSVKVQHPQLPHINTVDCVEIYGPPTNPEANYKNVVIFGNRQADRSPCGTGTSAKMATLYAKGQLRIGETFVYESILGSLFQGRVLGEERIPGVKVPVTKDAEEGMLVVTAEITGKAFIMGFNTMLFDPTDPFKNGFTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164249 for 2674 contacts (-61.4/contact) +
2D Compatibility (PS) -32953 + (NN) -13904 + (LL) 1080
1D Compatibility (HY) -24400 + (ID) 5800
Total energy: -240226.0 ( -89.84 by residue)
QMean score : 0.486
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