Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAESPTIR-LERYSERHVEGLTALYNDPAVARQVLQMPYQSVEQ----RRKRLHDSADDDRLLILVALHQGDVIGSASLEQHPRIRRSHSGSIGMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGEMRDYAVRDGRFVDVYSMARLRRVEGRVGE
4JLY Chain:A ((9-168))
------TLRALERGDLRFIHNLN---NNRNIMSYWFEEPYESFDELEELYNKHIHDNAER-RFVVEDA--QKNLIGLVELIEINYIHRS--AEFQIIIAPEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEECGFVEEGHLVEEFFINGRYQDVKRMYILQSKYLNRSE
General information:
TITO was launched using:
RESULT:
Template:
4JLY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49357 for 1046 contacts (-47.2/contact) +
2D Compatibility (PS) -16012 + (NN) -3173 + (LL) 912
1D Compatibility (HY) -12400 + (ID) 2500
Total energy: -82530.0 ( -78.90 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_4JLY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JLY-query.scw
PDB file :
Tito_Scwrl_4JLY.pdb
: