Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQSTRKLLAGLALAVSAGLVQAAPEVRIYNWFDYIAPDTLKNFQAQTGIAPKYDVYDSNEVLEAKLLSGHSGYDLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVLAGKDPGNRYVMPYMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGLSPNSHQPEDYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGAMQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIPRDAKNVEQAHAFLDYLLRPEVVAPISDYVAYANPNKAADGLISAELRDNPNVYPPEEVQARLYSVEMLPPKLERLRTRTWSKIKTGK |
3TTN Chain:A ((7-340)) | -------------------------LHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLPNWKNLDPALLKQLEVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQ-PIDSWAILFEPENMKKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168438 for 2932 contacts (-57.4/contact) +
2D Compatibility (PS) -35897 + (NN) -19744 + (LL) 2444
1D Compatibility (HY) -39600 + (ID) 10100
Total energy: -271335.0 ( -92.54 by residue)
QMean score : 0.629
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