Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALVDGFLELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFFEEASAAGLVYGLTMPLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAFEHPVSKPVVLTSREKEVLQWCAIGKTSWEISVICNCSEANVNFHMGNIRRKFGVTSRRVAAIMAVNLGLITL
2UV0 Chain:E ((8-170))
-----GFLELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFFEEASAAGLVYGLTMPLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAFE-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2UV0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101556 for 1298 contacts (-78.2/contact) +
2D Compatibility (PS) -17162 + (NN) -3210 + (LL) 6408
1D Compatibility (HY) -22800 + (ID) 8150
Total energy: -146470.0 ( -112.84 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_2UV0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UV0-query.scw
PDB file :
Tito_Scwrl_2UV0.pdb
: