Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPVLPLLLSLSLCAPALADWSGPIEQPLWSLPAAPGLSRWLIVHNLSSAAADGLYHVEVLERRQGQQPWQFQRLAAHLALTEQALRASIVAPLKRGGVYPESYQFAYRQWQERQAAGQAPVCRRTVDECLRAPD
4S0R Chain:A ((308-344))
--------------APCYVAWSAQNRSPLIRIPASRGISTRVEVRSVDPAANPYLALSVLLAAGLDGIKNKLEAPAPIDRNIYVMSKEERMENGIVDLPATLAEALEEFKSNEVMVKALGEHLFEHFIEAKEIEW
General information:
TITO was launched using:
RESULT:
Template:
4S0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8148 for 166 contacts (-49.1/contact) +
2D Compatibility (PS) -3972 + (NN) -2878 + (LL) 1276
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -16772.0 ( -101.04 by residue)
QMean score : -0.067
(partial model without unconserved sides chains):
PDB file :
Tito_4S0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4S0R-query.scw
PDB file :
Tito_Scwrl_4S0R.pdb
: