Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDYQETLYQGYGQRFSIDNMLHEVRTEHQHLVIFENARMGRVMALDGVIQTTEADEFIYHEMLTHVPILAHGAARRVLIIGGGDGGMLREVAKHKSVERITMVEIDGTVVDMCKEFLPNHSQGAFDDPRLNLVIDDGMRFVATTEERFDVIISDSTDPIGPGEVLFSENFYQACRRCLNEGGILVTQNGTPFMQLEEVRTTAARTDGLFADWHFYQAAVPTYIGGAMTFAWGSTHEGLR-RLPLETLRQRFRDSGIATRYYNADIHLGAFALPQYVLQAIGKQDND |
3RW9 Chain:A ((28-300)) | ------SLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIG-YSSSKLTLHVGDGFEFMKQNQDAFDVIITDS----GPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNPSTNFQEPVQPLTQQ-QVAQMQLKYYNSDVHRAAFVLPEFARKALND---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176060 for 2291 contacts (-76.8/contact) +
2D Compatibility (PS) -28477 + (NN) -8946 + (LL) 672
1D Compatibility (HY) -26800 + (ID) 5050
Total energy: -244661.0 ( -106.79 by residue)
QMean score : 0.454
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