Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFDAARYVHRYYASLAPAPGNEYPRLRAWEYLWEYVWDPSRSWDDLTAPEQLDTTALHLG----FYLANWGMF--RGSSGLLQNSNLDLMKALARQLFSGAGPELFELSLVDFAGNGARLAHNRKLLETVLGSMDALSSRVSWTDTLKSKILLGVWGEFPALDRHYVAACRALYPRRGLTSVNGGTLTALHRLIGEERLSFPRLETARKGLLYPTGRLADMAFFQYGLENA |
1OOP Chain:A ((148-228)) | -------------------PGGPVPT-KVNSYSWQTSTNPSVFWTEGSAPPRMSVPFIGIGNAYSMFYDGWARFDKQGTYGI---STLNNMGTLYMRHVNDGGPGPIVSTVRIYFKPKHVKTWVPRPPRLCQYQKAGNVNFEPTGVTEGRTDITTMKTT------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OOP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3941 for 308 contacts (12.8/contact) +
2D Compatibility (PS) -7393 + (NN) 2393 + (LL) 7680
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: 2371.0 ( 7.70 by residue)
QMean score : -0.140
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