Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLHIDSSILGDASASRQLSAELVQAWRQNEDGLDVTYRDLAADAVAHFSALTLAAGSTPAELRDAALKHE-VAVGEEVLEEFLAADVVVIGAPMYNFTISSQLKAWIDRIAVAGKTFRYTENGPVGLAGDKKVVIVSTAGGVHAGQPTGAAHEGYLRTVLGFFGITDIEVVRAEGLAYGEEPRTQAIAAARRQIAGQFAAA
2Z9D Chain:A ((2-194))
-KVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDG-ELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTP-YLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSA-
General information:
TITO was launched using:
RESULT:
Template:
2Z9D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111747 for 1447 contacts (-77.2/contact) +
2D Compatibility (PS) -21496 + (NN) -11199 + (LL) 356
1D Compatibility (HY) -17600 + (ID) 4250
Total energy: -165936.0 ( -114.68 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_2Z9D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z9D-query.scw
PDB file :
Tito_Scwrl_2Z9D.pdb
: