Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRDRLYTWAGLWRSPSSSWEALRLEDDQAESQLRAPDERSGLPYQLDYRLRWDADWHLREAVFHVESETGVRKLHLLADGRGHWQDGDGEALPAFDGCLDIDIWPSPFTNTFPIRRLGLADGQRAEIRALYIEAPALEPRSMRQAYTRLDASHYLYENLEGSAFKAVLLVDEQGLVIDYPGLFQRL
2H1T Chain:B ((5-188))
---DRLYTWAGLWRSPSSSWEALRLEDDQAESQLRAPDERSGLPYQLDYRLRWDADWHLREAVFHVESETGVRKLHLLADGRGHWQDGDGEALPAFDGCLDIDIWPSPFTNTFPIRRLGLADGQRAEIRALYIEAPALEPRSMRQAYTRLDASHYLYENLEGSAFKAVLLVDEQGLVIDYPGLFQRL
General information:
TITO was launched using:
RESULT:
Template:
2H1T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83667 for 1302 contacts (-64.3/contact) +
2D Compatibility (PS) -18680 + (NN) 294 + (LL) 280
1D Compatibility (HY) -24400 + (ID) 9200
Total energy: -135373.0 ( -103.97 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_2H1T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H1T-query.scw
PDB file :
Tito_Scwrl_2H1T.pdb
: