Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTLKGKTALVTGSTSGIGLGIALSLAEAGADLLLNGFG---EVDAALAQVRAR-GVRAEHHPADLSSPEQIGELMAFAERTFGGVDILVNNAGIQYVAPVQEFPTERWDAIIAINLSSVFHTTRLALPGMLARGWGRIVNIASTHGLVASAGKSAYVAAKHGVLGLTKSVALETARTPVTCNAICPGWVLTPLVQKQIDARTAE-GVSPEQAEHDLLAEKQPSLAFVTPEQLGGLTLFLCSEAADQVRGAAWNMDGGWVAQ
3VDQ Chain:A ((2-260))--LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICPGWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQFVTPEQLGGAAVFLSSAAADQMTGTTLSLDGGWTAR


General information:
TITO was launched using:
RESULT:

Template: 3VDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -150216 for 2193 contacts (-68.5/contact) +
2D Compatibility (PS) -27509 + (NN) -8900 + (LL) 260
1D Compatibility (HY) -22400 + (ID) 7700
Total energy: -216465.0 ( -98.71 by residue)
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_3VDQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VDQ-query.scw
PDB file : Tito_Scwrl_3VDQ.pdb: