Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIENRVFLVTGGSSGLGAATAKMLVEQGGKVVLADINAEAGAAKAAELGAQARFVRADIASEADGRQAVAAALEAFGGLHGLANCAGVAPAEKV--LGRNGIHALESFRRVIDINLVGSFNMLRLAAEAMSQGQPDEGGERGVIVNTASVAAFDGQIGQAAYSASKSGVVGMTLPIARELARFGIRVMTIAPGIFETPMMAGMPQEVRDSLGASVPFPPRLGRPDEYAALVRQIIENSMLNGEVIRLDGAIRMAAR
1U7T Chain:A ((8-259))
--VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVRNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM---
General information:
TITO was launched using:
RESULT:
Template:
1U7T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130654 for 2146 contacts (-60.9/contact) +
2D Compatibility (PS) -27511 + (NN) -11338 + (LL) 696
1D Compatibility (HY) -25200 + (ID) 7300
Total energy: -201307.0 ( -93.81 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_1U7T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U7T-query.scw
PDB file :
Tito_Scwrl_1U7T.pdb
: