Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSNAQRALIKATVPLLETGGEALITHFYRTMLGEYPEVRPLFNQAHQASGDQPRALANGVLMYARHIDQLQELGPLVAKVVNKHVSLQVLPEHYPIVGTCLLRAIREVLGEQIATDEVLEAWGAAYQQLADLLIEAEESVYAASAQADGGWRGVRRFRVARKQAESEEITSFYLEPVDGQPL----LAFQPGQYIGLRLDIDGEEVR----RNYSLSAASNGREYRISVKREA------GGRVSNYLHDRVAEGDELDLFPPAGDF-----VLRDSDKPLVLITAGVGITPALAMLQEALP--QARPIRFIHCARHGGVHAFRDWIEDVSAQHEQVEHFFCYSEPRAGDSADAEGLLSREKLADWLPQERDLDAYFLGPRPFMAQVKRHLADLGVPSQQCHYEFFGPAAALDA |
| 4G1B Chain:A ((1-392)) | MLAEKTRSIIKATVPVLEQQGTVITRTFYKNMLTEHTELLNIFNRTNQKVGAQPNALATTVLAAAKNIDDLSVLMDHVKQIGHKHRALQIKPEHYPIVGEYLLKAIKEVLGDA-ATPEIINAWGEAYQAIADIFITVEKKMY-----EEALWPGWKPFEITAKEYVASDIVEFTVKPKFGSGIELESLPITPGQYITVNTHPIRQENQYDALRHYSLCSASTKNGLRFAVKMEAARENFPAGLVSEYLHKDAKVGDEIKLSAPAGDFAINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKCNPNRPIYWIQSSYDEKTQAFKKHVDELLAECANVDKIIVHT--------DTEPLINAAFLKEKSPAHADV--YTCGSLAFMQAMIGHLKELEHRDDMIHYEPFGP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256857 for 2925 contacts (-87.8/contact) +
2D Compatibility (PS) -39851 + (NN) -16985 + (LL) 1548
1D Compatibility (HY) -32000 + (ID) 7550
Total energy: -351695.0 ( -120.24 by residue)
QMean score : 0.496
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