Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLFDTLTLPNGSTIPNRLAKA---AMEENMADAAQAPSERLMRLYQAWADGGAGLLISGNVMVDSRAMTGPGGVVLED-----DAQLEKFRRWARIGRSAGAQFWLQINHPGRQMQANLGQQAWAPSAVPLELGGMSRHFATPKAMDEAMIAEVIQRFARSAGLAERAGFSGVEIHAAHGYLLSQFLSPLSNRRSDAWGGSLENRARLLLEIVRAVRAEVAPGFAVAVKLNSADFQRGGFSADDAREVVRMLDGLGVDLVELSGGSYEAPAMQGEARDGRTLAREAYFVEFARDIRAAARMPVMVTGGIRRRPVAEQVLASG-VDMVGIGTALAIEPNLPRDWRAGKDSAPQLRPITWRNKPLASLANMAAVKFQLRKLSRGRATNPRVSPLCALLAQQAGALLQTRRYRRLMRSRAEA |
| 1Z42 Chain:A ((4-318)) | -KLFTPITIKD-MTLKNRIVMSPMCMYSSHEKDGKLTPFHMAH--YISRAIGQVGLII-----VEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQGSKIGIQLAHAGRK--AELEGDIFAPSAIAFD-----EQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVK-QVWDG-PLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADIN---------VFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFAR------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166419 for 2699 contacts (-61.7/contact) +
2D Compatibility (PS) -32845 + (NN) -15493 + (LL) 7376
1D Compatibility (HY) -20000 + (ID) 5250
Total energy: -232631.0 ( -86.19 by residue)
QMean score : 0.526
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