Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAILVIAEHNNAALAAATLNTVAAAKAIGGDIHVLVAGQNVAAVAEAAAKVEGVSKVLVADNAAYAHQLPENVAPLIAELGKNY--SHVLAPATTNGKNFLPRVAALLDVDQISEIVEVVSPD----TFKRPIYAGNAIATVQSSAAV-KVITVRTTGFDAV---AAEGGSAAVEQVSGPADAGKSAFVGEELAKSDRPELTAAKIVVSGGRGMQNGDNFKILYALADKLGAAVGASRAAVDAGFVPNDMQVGQTGKIVAPQLYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFDAVPELEKAV |
| 4KPU Chain:A ((67-330)) | ---------------------------------------------------RGADLVYVCQDPAFKYYSTDEYTNAFCEMIDEYQPSSVFIGATNDGRDLGPRIAARVNTGLCADCTILDAEEDGLIEWTRPAAGGNIMATILCKEHRPQMGTVRPKTFKAMEPDASRTGEVINYTLKNHVDDRVTCIRREEVVSEGEMAIDDAPFVCSGGRGMKAKENFSLLYDLAHALGGAVGGSRAAVDEGFIEHPRQVGQSGKTVTPKIYFACGISGSVQHKAGMSKSDTIVCINKDPDAPMFEISKYGIVGDALKILPLL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128160 for 1894 contacts (-67.7/contact) +
2D Compatibility (PS) -27437 + (NN) -8058 + (LL) 5904
1D Compatibility (HY) -17200 + (ID) 4650
Total energy: -179601.0 ( -94.83 by residue)
QMean score : 0.416
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