Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPLIGQLYRNNNVVTSIHGRGLINRSVIAIMKAHRFARHRMADDAELSVHETFPILKAMSELKLGAASVDLGKMVAKFKAEGNGRSIEDFVKAELAEVVGKQNGDAREGTDVVLYGFGRIGRLLARILIEKTGGGDGLRLRAIVVRKGAENDLVKRASLLRRDSVHGPFDGTITIDEENNTLTANGNLIQVIYSNDPASIDYTQYGIKNALLVDNTGKWRDAEGLGQHLKCPGIDRVVLTAPGKGALKNIVHGINHTDIGADD-KIISAASCTTNAIVPVLKAVNDQYGIVNGHVETVHSYTNDQNLIDNFHKGS--RRGRSAPLNMVITETGAATAAAKALPVLKGKLTGNAIRVPTPNVSMAILNLNLEKATTREEINEYLRQMAMHSDLQKQIDFVSSQEVVSTDFVGSRHAGVVDAEATIC-NDNRVVLYVWYDNEFGYSCQVVRVMEDMAGVNPPAFPR |
| 3CPS Chain:A ((24-343)) | --------------------------------------------------------------------------------------------------------------------GFGRIGRLVLRACMERND-------ITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSG-D--LCINGKVVKVFQAKDPAEIPWGASGAQ--IVCESTGVFTTEEKASLHLK-GGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKG-DWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEAS--NGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYDNESGYSNRLV---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CPS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151305 for 2670 contacts (-56.7/contact) +
2D Compatibility (PS) -33964 + (NN) -13979 + (LL) 9796
1D Compatibility (HY) -21600 + (ID) 6550
Total energy: -217602.0 ( -81.50 by residue)
QMean score : 0.500
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