Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRLKRDPLERAFLRGYQNGITGKSRDLCPFTHPTTRQSWLNGWREGRGDNWDGLTGTAGLQRLNQLQHV
1IYC Chain:A ((13-21))
-----------------------RSRSNCPKG--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IYC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 908 for 18 contacts (50.4/contact) +
2D Compatibility (PS) -870 + (NN) -350 + (LL) 2708
1D Compatibility (HY) 400 + (ID) 200
Total energy: 2596.0 ( 144.22 by residue)
QMean score : 0.349
(partial model without unconserved sides chains):
PDB file :
Tito_1IYC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IYC-query.scw
PDB file :
Tito_Scwrl_1IYC.pdb
: