Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLQRGFTLLELLIAIAIFALLALATYRMFDSVMQTDQATRVQEQRMRELVRAMGALERDLTQAVERPVRDELGDNRGAFLSEGENDQIVEFTRGGWRNPLGQARSRLQRVRWSLSGETLERRYWLVLDRAQDSKPRVQQVLDGVTALSWRFLDKEHNWQGHWPTDEGSEEERLESLPLAVEMTLEHRHYGKLVRVWRLLDPPLKQDQPQGQPGGENGENGEGGVPQPPEGMPGAPE |
| 5A1Y Chain:X ((189-244)) | --------------------------------------------------------------------------------------------------------------VNLAVGGEKLQEAYYIFQELADKCSPTLL-LLNGQAAC--------HSAQGRWETAEGVLQEALD-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11401 for 325 contacts (35.1/contact) +
2D Compatibility (PS) -5632 + (NN) -1227 + (LL) 11768
1D Compatibility (HY) 400 + (ID) 200
Total energy: 16510.0 ( 50.80 by residue)
QMean score : -0.115
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