Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQS----EFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKVAREKSPHKYEVDLTYITSRGNWYLKS--WKGDPRKSFGVATNIGVHFYDMLHFIFGKLQRNVVHFTSEYKAAGYLEYEQ---ARVRW------FLSVDANDLPESVKGKKPTYRSITVNGEEMEFSEGFTDLHTTSYEEILAGRGYGIDDARHCVETVNTIRSAVIVPASDNEGHPFVAALAR |
| 3Q2K Chain:A ((33-278)) | ---FGLVGC-GRISKNHIGAIAQHG-------DRAELVEICDT-NPEALQAAEAATGARPFSSLSDMLAQGNADAL---VLATPSGLHPWQAIEVAQAGRHVVSEKPMATRWEDGKRMVKACDEAGVRLFVVKQNRRNATLQLVKKAIEQGRFGRIYMVTVNVFWTRPQEYYDAARWRGKWEWDGGAFMNQASHYVDLLDWLVGPVE-SVYAYTATL--ARRIEAEDTGVAALRWRHGAMGSINVTMLTYPQNLEG------SITILGEK------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q2K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112898 for 1739 contacts (-64.9/contact) +
2D Compatibility (PS) -24594 + (NN) -7059 + (LL) 5696
1D Compatibility (HY) -8800 + (ID) 3200
Total energy: -150855.0 ( -86.75 by residue)
QMean score : 0.410
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