Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVLVIESSARQRGSVSRLLTAEFISHWKIAHPADRFQVRDLAREPLPHLDELLLGAWTTPCDGH-SAAERRALERSNRLTEELRMADVLVLAAPMYNFAIPSSLKSWFDHVLRAGLTFRYAEQGPEGLLQGKRAFVLTARGGIYAGGGLDHQEPYLRQVLGFVGIHDVTFIHAEGMNMGPEFREKGLARARERMRQALETDTSLCVPLPTLR
2Z9C Chain:A ((1-191))
-SKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALR----APLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAK---------------------
General information:
TITO was launched using:
RESULT:
Template:
2Z9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110328 for 1401 contacts (-78.7/contact) +
2D Compatibility (PS) -20415 + (NN) -7567 + (LL) 1804
1D Compatibility (HY) -17600 + (ID) 4550
Total energy: -158656.0 ( -113.24 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_2Z9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z9C-query.scw
PDB file :
Tito_Scwrl_2Z9C.pdb
: