Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTKGGLEVATTDKEFSFKLGGRLQADYGRFDGYYTNNGNTADAAYFRRAYLEFGGT--AYRDWKYQINYDLSRN--------VGNDSAGYFDEASVTYTGFNPVNLKFGRFYTDFGLE-KATSSKWVTALERNLTYDIADWVNDNVGTGIQASSVV-----GGMAFLSGSVFSENNND---------------TDGDSVKRYNLRGVFAPLHEPGNVVHLGLQYAYRDLEDSAVDTRIRPRMGMRGVSTNGGNDAGSNGNRGLFGGSSAVEGLWKDDSVWGLEGAWALGAFSAQAEYLRRTVKAER--DREDLKASGYYAQLAYTLTGEPRLYKLDGAKFDTIKPENKEIGAWELFYRYDSIKVEDDNIVVDSATREVGDAKGKTHTLGVNWYANEAVKVSANYVKAKTDKISNA--NGDDSGDGLVMRLQYVF |
| 2J1N Chain:A ((6-346)) | ----------------------------------------------------KDGNKLDLYGKVDGLHYFSDNKD-------VDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNSAENENNSWTRVAFAGL-----KFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTY-GSDN--FMQQRGNGFATYRNTDFFGLVDGLNF-AVQYQGKNGNPSGEGFTSGVTNNGRDALRQNGDGVGGSITYDY-----EGFGIGGAISSSKRTDA-------QN-----------T-AA-------------YIGNGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDF------------------G-----LRPSLAYLQSKGKNLGRG------YDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLVYQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 98976 for 2431 contacts (40.7/contact) +
2D Compatibility (PS) -31563 + (NN) -37 + (LL) 5932
1D Compatibility (HY) 5200 + (ID) 1850
Total energy: 76658.0 ( 31.53 by residue)
QMean score : ?
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