Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSHQERPLIGLLFSETGVTADIERSQRYGALLAVEQLNRE--GGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSHT-----------RKAVMPVVERADALL---CYPTPYEGFEYSPNIVYGGPAPNQNSAPLAAYLIRHYGERVVFIGSDYIYPRESNHVMRHLYRQHGGTVLEEIYIPLYPSDDDVQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASLTTSEAEVAKMESDVAEGQVVVAPYFSSIDTAASRAFVQACHGFFPENATITAWAEAA-YWQTLLLGRAAQAAGSWRVEDVQRHLYDICIDA--PQGPVRVERQNNHSRLSSRIAEIDARGVFQVRWQSPEPIRPDPYVVVHNLDDWSASMGGGALP |
| 3I09 Chain:A ((7-331)) | ---------IGFITDMSGLYADIDGQ---GGLEAIKMAVADFGGKVNGKPIEVVYADHQNKADIAASKAREWMDRGGLDLLVGGTNSATALSMNQVAAEKKKVYINIGAGADTLTNEQCTP-------YTVHYAYDTMALAKGTGSA---VVKQGGKTWFFLTADYAFGKALEKNTADVVKANGGKVLGEVRHPLSAS--DFSSFLLQAQSSKAQILGLANAGGDTVNAIKA-AKEFGITKTMKLAALLMFINDVHALGLETTQGLVLTDSWYWNRDQ-ASRQWAQR---YFAKMKKMPSSLQAADYSSVTTYLKAVQAAGSTDSDKVMAQLKKMKIDDFYAKGYIRTDGSMIH-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I09.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144138 for 2734 contacts (-52.7/contact) +
2D Compatibility (PS) -33413 + (NN) -10998 + (LL) 3872
1D Compatibility (HY) -9200 + (ID) 3950
Total energy: -197827.0 ( -72.36 by residue)
QMean score : 0.585
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