Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRLEPGMARIRVKDLRLRTFIGIKEEEILNKQDVLINLTILYPAADAVEVNDIEHALNYRTITKAIIRHVEENRFALLERMTQEILDLVMENPAVRYAEVEVDKPHALRFAESVSITLAGHR
1Z9W Chain:A ((4-102))
---------RIELRGLTVHG-----------GQRFVIDVTVWIDLAEAANSDDLADTYDYVRLASRAAEIVAGPPRKLIETVGAEIADHVMDDQRVHAVEVAVHKPQA---------------
General information:
TITO was launched using:
RESULT:
Template:
1Z9W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67926 for 558 contacts (-121.7/contact) +
2D Compatibility (PS) -9238 + (NN) 230 + (LL) 2872
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: -82112.0 ( -147.15 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_1Z9W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z9W-query.scw
PDB file :
Tito_Scwrl_1Z9W.pdb
: