Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIIETIKEQIANNPILLYMKGSPNAPQCGFSSRAAQVLMACGEKFAYVDILQNPEIRANLPKYANWPTFPQLWVNGELVGGSDILAEMFEKGELQTLVKDAAAKANA
3ZYW Chain:A ((4-105))
-DLNLRLKKLTHAAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYVSGELIGGLDIIKELEASEELDTICPKAA-----
General information:
TITO was launched using:
RESULT:
Template:
3ZYW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76098 for 733 contacts (-103.8/contact) +
2D Compatibility (PS) -11368 + (NN) -6339 + (LL) 624
1D Compatibility (HY) -10000 + (ID) 2050
Total energy: -105231.0 ( -143.56 by residue)
QMean score : 0.676
(partial model without unconserved sides chains):
PDB file :
Tito_3ZYW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZYW-query.scw
PDB file :
Tito_Scwrl_3ZYW.pdb
: