Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTSHLIRIALPGALAAALLASQVSQAADLVPPPGYYAAVGERKGSAGSCPAVPPPYTGSLVFTSKYEGSDSARATLNVKAEKTFRSQIKDITDMERGATKLVTQYMRSGRDGDLACALNWMSAWARAGALQSDDFNHTGKSMRKWALGSLSGAYMRLKFSS--SRPLAAHAEQSREIEDWFARLGTQVVRDWSGLP---LKKINNHSYWAAWSVMSTAVVTNRRDLFDWAVSEFKVAANQVDEQGFLPNELKRRQRALAYHNYALPPLAMIAAFAQVNGVDL--RQENHGALQRLAERVMKGVDDEETFEEKTGEDQDMTDLKVDNKYAWLEPYCALYRCEPKMLEAKKDREPFNSFRLGGEVTRVFSREGGS |
| 4F10 Chain:A ((50-306)) | ---------------------------------------------------ATPNPQQGEMVIPRRYLSGNHGPVNPDYEPVVTL------YRDFEKISATLGNLYVATGKPVYATCLLNMLDKWAKADAL----LNYDPKS-QSWYQVEWSAATAAFALSTMMAEPNVDTAQRERVVK-WLNR----VARHQTSFPGGDTSCCNNASYWRGQEATIIGVISKDDELFRWGLGRYVQAMGLINEDGSFVHEMTRHEQSLHYQNYAMLPLTMIAETASRQGIDLYAYKENGRDIHSARKFVFAAVKNPDLIKKYASEPQDTRAFK-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57982 for 2031 contacts (-28.5/contact) +
2D Compatibility (PS) -27002 + (NN) -15455 + (LL) 6484
1D Compatibility (HY) -13600 + (ID) 3550
Total energy: -111105.0 ( -54.70 by residue)
QMean score : 0.484
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