Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMDINEIREYLPHRYPFLLVDRVVELDIEGKRIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGILGFKML---DVKPADGTLYYFVGSDKLRFRQPVLPGDQLQLHAKFISVKRSIWKFDCHATVDDKPVCSAEI--ICAERKL
3B7J Chain:A ((14-159))
---IEHILQILPHRYPMLLVDRITELQ-ANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAERE-
General information:
TITO was launched using:
RESULT:
Template:
3B7J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112037 for 1049 contacts (-106.8/contact) +
2D Compatibility (PS) -14955 + (NN) -4876 + (LL) 720
1D Compatibility (HY) -16800 + (ID) 3550
Total energy: -151498.0 ( -144.42 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_3B7J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B7J-query.scw
PDB file :
Tito_Scwrl_3B7J.pdb
: