Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVTIKTPDDIEKMRIAGRLAAEVLEMIGEHIKPGVTTEELDRICHDYIVNEQKAIPAPLNYKGFPKSICTSINHVVCHGIPNE-KPLKEGDILNVDITVIKDGYHGDTSKMFLVGKTPEWADRLCQITQECMYKGISVVRPGAHLGDIGEIIQKHAEKNGFSVVREYCGHGIGKVFHEEPQVLHYGRAGTGIELKEGMIFTIEPMINQGRPETRLLGDGWTAITKDRKLSAQWEHTVLVTADGYEILTLRNDETFPRTSAA
2BB7 Chain:A ((5-257))
----IKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIP-----
General information:
TITO was launched using:
RESULT:
Template:
2BB7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141171 for 2215 contacts (-63.7/contact) +
2D Compatibility (PS) -27654 + (NN) -10928 + (LL) 916
1D Compatibility (HY) -30000 + (ID) 8400
Total energy: -217237.0 ( -98.08 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_2BB7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BB7-query.scw
PDB file :
Tito_Scwrl_2BB7.pdb
: