Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTAFFFDELCLWHAAGPHALTLPVGGWVQPPAAAGHAESPETKRRLKSLLDVSGLTARLQLRSAPPASDEDLLRVHPAHYLERFKALSDAGGGSLGQDAPIGPGSYEIARLSAGLAIAALDAVLAGEADNAYSLSRPPGHHCLPDQAMGFCFFANIAVAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQ--DGCFPPGYSGAEDIGEDRGRGFNLNVP----LLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDA--NAVDPLARMQLHSDSFRAMTAMVRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRSAVRDPLRDFIELQQPNA-AFRDFQRQRLEELAAQFGLCPAQPLQAAR |
| 2VQO Chain:A ((127-386)) | ---------------------------------------------------------------------------------------------------------------ARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGL----AGGRIVLALEGGYDLTAICDASEACVSALLGNE---LDPLPEKVLQQRPNANAVRSM--EKVMEIHSKYWRC--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -165779 for 2192 contacts (-75.6/contact) +
2D Compatibility (PS) -28032 + (NN) -20206 + (LL) 7336
1D Compatibility (HY) -18400 + (ID) 4750
Total energy: -229831.0 ( -104.85 by residue)
QMean score : 0.537
|
|
|