Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALQRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKADAGTIRADFAVSIDENAVHGSDSEASAAREIAYFFAATEVCERIR
4W98 Chain:A ((3-145))
MAIERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSDSVASAEREIAYFFADNEICPRTR
General information:
TITO was launched using:
RESULT:
Template:
4W98.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53815 for 1085 contacts (-49.6/contact) +
2D Compatibility (PS) -14903 + (NN) -688 + (LL) 0
1D Compatibility (HY) -14800 + (ID) 5250
Total energy: -89456.0 ( -82.45 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_4W98.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4W98-query.scw
PDB file :
Tito_Scwrl_4W98.pdb
: