Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGVSRLLSLALLGAALHWAPAQAEEQPRLFELLGQPGYKATWHA---------------MFKGESDVPKWVSDASGPSSPSTSLSLEGQPYVLANSCKPHDCGNNRLLVAFRGDKSAAYGLQVSLPDEPAEVMQTPSKYATYRWYGEPSRQVRELLMKQLESDPNWK |
1KC1 Chain:A ((50-180)) | ---VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEK-ALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 784 for 636 contacts (1.2/contact) +
2D Compatibility (PS) -11254 + (NN) 7609 + (LL) 2024
1D Compatibility (HY) -3600 + (ID) 1550
Total energy: -5987.0 ( -9.41 by residue)
QMean score : -0.038
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