Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFSWSEILLELLAVAVLFFGVHWSLRHAKTLDQASMLPFADDEEVARRVERETGRSRTGCGCPGRCQGDCRHWDKNWPA
2JP3 Chain:A ((13-38))
-DWESLQLGGLIFGGLLCIAGIALALS-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JP3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8555 for 100 contacts (-85.5/contact) +
2D Compatibility (PS) -2775 + (NN) -3299 + (LL) 2472
1D Compatibility (HY) -2000 + (ID) 100
Total energy: -14257.0 ( -142.57 by residue)
QMean score : 0.001
(partial model without unconserved sides chains):
PDB file :
Tito_2JP3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JP3-query.scw
PDB file :
Tito_Scwrl_2JP3.pdb
: