Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHATSSDDFSLSSRVALVTGAGRGIGRGIALALARAGADVAVADLDPQVAEETAAAIRSLGRRSLALGVDVSDGDSVRAMVERVATEFGRLDVAVNNAGVISIRKVAELSLADWDRVMNVNARGVFLCCQ-AELPLMQAQRWGRIVNLSSIAGKVGLPDLAHYCASKFAVIGFSNALAKEVARDGVTVNALCPGIVGTGM------WRGEDGLSGRWRQAGESEAQSWERHQASLLPQGEAQTVEDMGQLVVYLA--CAPHVTGQAIAVDGGFSL |
| 3AK4 Chain:A ((8-262)) | --------FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG---FAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAE--LRGMTPEAVRAE-------YVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVRM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160925 for 2132 contacts (-75.5/contact) +
2D Compatibility (PS) -26214 + (NN) -6021 + (LL) 804
1D Compatibility (HY) -17600 + (ID) 5550
Total energy: -215506.0 ( -101.08 by residue)
QMean score : 0.504
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