Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQAR-RERAINGA--DLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGELLRYFNYSSVDARGYFILMPC--------------ESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAER-------------NRLYVDSQGGLAYFYPIGFDRARLVVSF--PREEARELMAD--TRGESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADN----VAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVFDTALQGSSRTPEALGGERSYQPVRSPAPLG |
| 3V3O Chain:A ((8-348)) | ------NVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLL--------------QTYYDLALPMGVNIA--DKKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVI---WDRKLVMLEPGKKKWT--LTFENKPSETADLVILANGGMSKVRKFVTDTEVEE--------TGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGISFKTPDEWKN---VDFQNRNSVVDFLLKKF-SDWDERYKELIHATLSFVGLATRIFPLEKPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSD--NLADGKFNSIEEAVKNYEQQMF--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180525 for 2328 contacts (-77.5/contact) +
2D Compatibility (PS) -32335 + (NN) -10831 + (LL) 5908
1D Compatibility (HY) -12400 + (ID) 4300
Total energy: -234483.0 ( -100.72 by residue)
QMean score : 0.438
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