Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTLLKLLQDGR--FHSGEELGAVLGISRSAVWKRLQHLEAEHGLQFHKVRGRGYRLASPLSLLDPRKID------SLWPV-EIMPTVDSTNSEAMRRLAAGASTPFVIVAEQQTAGRGRRGRAWVSPYGENLYYSLAITVRGGARELEGLSLVVGLAVLRALESLGVQDTGLKWPNDLLQGGKKIAGILLELSGDPADLCHVVIGIGINVNMKTAT---DIGQPWTSLREALGELVDRSRLLSALNRQLADYLDRHSREGFAASREEWESC-NLWQGAQVILSTALSSIEGRVLGVDSRGALRLEVDGVEQGFSGGELSLRLRQ |
| 4HA8 Chain:A ((11-309)) | -QDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLE-GCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLV-GNQSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLPFSEIREEYNAASNIWNRT-LLFTENDKQFKGQAIDLDYDGYL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137902 for 2205 contacts (-62.5/contact) +
2D Compatibility (PS) -30694 + (NN) -11475 + (LL) 1768
1D Compatibility (HY) -23200 + (ID) 3850
Total energy: -205353.0 ( -93.13 by residue)
QMean score : 0.490
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