Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKNKTFLAAALVALAASFPVHAATDYTRTRYPIVLSHGLFGF-KSVGPVDYWHAIVPALEKDGAKVFATSQSPVNSNEV---RGEQLLAQVEEVLALTGAEKVNLIGHSQGGMTVRYVAGVAPQLVASVTTMGTPHKGTPVADAVTGFSEFLGPIG--TEVIASAVEALFSVVDIVDGGEWVKGDALAALNSLNTPGTARFNQRFPQA---IPASACGQGA--ETVAGVRY--YSMSGT--------GSLT--------------NALDPSSAGLAVTGLLF----GEANDGLVGQCSSHLGSVVKDNYRMDHLDEVNQLLGLVSLFESDPTQVYRQHANRLRNVGL
1YS1 Chain:X ((1-320))-----------------------ADNYAATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQLLAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHRGSEFADFVQGVLAY-DPTGLSSTVIAAFVN-VFGI--LTSSSNNTNQDALAALKTLTTAQAATYNQNYPSAGLGAPGS-CQTGAPTETVGGNTHLLYSWAGTAIQPTISVGGVTGATDTSTIPLVDPANALDPSTLALFGTGTVMVNRGSGQNDGVVSKCSALYGQVLSTSYKWNHLDEINQLLGVRGANAEDPVAVIRTHANRLKLAGV


General information:
TITO was launched using:
RESULT:

Template: 1YS1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53620 for 2426 contacts (-22.1/contact) +
2D Compatibility (PS) -30200 + (NN) -11292 + (LL) 2868
1D Compatibility (HY) -20800 + (ID) 7150
Total energy: -120194.0 ( -49.54 by residue)
QMean score : 0.367

(partial model without unconserved sides chains):
PDB file : Tito_1YS1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YS1-query.scw
PDB file : Tito_Scwrl_1YS1.pdb: