Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQQIQRDIAQALQVQPPFQSEADVQAQIARRIAFIQQCLKDSG-LKTLVLGISGGVDSLTAGLLAQRAVEQLREQTGDQAYRFIAVRLPYQVQQDEADAQASLATIRADEEQTVNIGPSVKALAEQLEALEGLEPAKSDFVIGNIKARIRMVAQYAIAGARGGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLAKHQVRALARALGAPENLVEKIPTADLEDLRPGHPDEASHGVTYAEIDAFLHGQPLREEAARVIVDTYHKTQHKRELPKAP |
3HMQ Chain:A ((3-265)) | ---LQQEIIQALGAKPHINPEEEIR----RSVDFLKAYLKTYPFLKSLVLGISGGQDSTLAGKLSQMAIAELREETGDNALQFIAVRLPYGVQADEQDCQDAIAFIQPDRVLTVNIKGAVLA-SEQALREAGIE--LSDFVRGNEKARERMKAQYSIAGMTHGVVVGTDHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQLLAALGCPEHLYKK-------------PDEAALGVTYDNIDDYLEGKTLDPAIAKTIEGWYVKTEHKRRLP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HMQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99860 for 1956 contacts (-51.1/contact) +
2D Compatibility (PS) -27760 + (NN) -18778 + (LL) 1704
1D Compatibility (HY) -17600 + (ID) 6700
Total energy: -168994.0 ( -86.40 by residue)
QMean score : 0.567
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