Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLPSGDQPAEPGNA
4J6X Chain:A ((6-71))
-----SLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLP-----------
General information:
TITO was launched using:
RESULT:
Template:
4J6X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43519 for 409 contacts (-106.4/contact) +
2D Compatibility (PS) -7278 + (NN) -1676 + (LL) -180
1D Compatibility (HY) -11200 + (ID) 3300
Total energy: -67153.0 ( -164.19 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_4J6X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J6X-query.scw
PDB file :
Tito_Scwrl_4J6X.pdb
: