Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYG--RSEERLGPLLRG-QREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALREG--DCAMVTYN-LNERAERPVIEYAAAHAKGILVKKALASGHACLGAGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAAQALKKA |
| 1PYF Chain:A ((6-209)) | ------------LGKSDLQVFPIGLGTNAVGGHN--LYPN----LNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPD---EHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSG--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69762 for 1551 contacts (-45.0/contact) +
2D Compatibility (PS) -21679 + (NN) -7643 + (LL) 5000
1D Compatibility (HY) -11200 + (ID) 3500
Total energy: -108784.0 ( -70.14 by residue)
QMean score : 0.549
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