Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIPSAIQLHKASKTLTLRYGEDSYDLPAEFLRVHSPSAEVQGHGNPVLQYGKLNVGLVGVEPAGQYALKLSF---------DDGHDSGLFTWDYLYELATRKDQLWADYLAELASAGKSRDPDESVVKLML
4HG9 Chain:A ((2-64))
-----------------------------------------------LLQFRKMIKKMTGKEPVVSYAFYGCYCGSGGRGKPKDATDRCCFVHDCCYEKVTGCDPKWDDY----------------------
General information:
TITO was launched using:
RESULT:
Template:
4HG9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4710 for 269 contacts (-17.5/contact) +
2D Compatibility (PS) -5151 + (NN) 867 + (LL) 4156
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -8988.0 ( -33.41 by residue)
QMean score : -0.083
(partial model without unconserved sides chains):
PDB file :
Tito_4HG9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HG9-query.scw
PDB file :
Tito_Scwrl_4HG9.pdb
: