Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRVTLSRYLIEQTR--SHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQIPGRYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPNEYLNQNDTLREEAFLQPGTTQVAAGYAIYGPQTMLMLTLGNGVKGFTLDRELGSFVLTHDNISVPESTAEFAINMSNQRHWEAPVKRYVEELLAGKEGPLGKNYNMRWIASMVADVHRILTRGGVFMYPRDAREPEKPGKLRLMYEANPMSFIIEQAGGAATNGTQRILDIKPENLHQRVAVFLGSKQEVERITGYHAE |
2OX3 Chain:A ((3-322)) | ----TLGEFIVEKQHEFSHAT-GELTALLSAIKLGAKIIHRDINKAGL-----------------QKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEG-CEHAKYVVLMDPLDGSSNIDVNVSVGTIFSIYR---RVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYI-KFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPD--GKLRLLYECNPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDV------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OX3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186625 for 2617 contacts (-71.3/contact) +
2D Compatibility (PS) -32528 + (NN) -16874 + (LL) 1052
1D Compatibility (HY) -30000 + (ID) 6750
Total energy: -271725.0 ( -103.83 by residue)
QMean score : 0.513
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