Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRILLLGANGQVGWELQRALAPLG-ELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYTAVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSVPFAEDAPTGPLSVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGAPTSAELIADVTAQALQRLCWDVELAARASGTYHLVASGETSWHLYARFVIEQALERGWELQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWRYHAGRMIQELSEQGPL |
3SC6 Chain:A ((7-273)) | --RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPT---YVADLNVM-INKL-----IHTSLYGTYHVSNTGSCSWFEFAKKIFSYA--------NMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSW----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -124797 for 2273 contacts (-54.9/contact) +
2D Compatibility (PS) -28814 + (NN) -12549 + (LL) 2868
1D Compatibility (HY) -21200 + (ID) 4900
Total energy: -189392.0 ( -83.32 by residue)
QMean score : 0.582
|
|
|